Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915879.1_cds_XP_016465632.1_58568
CDS Infomation

[gene=LOC107788464] [db_xref=GeneID:107788464] [protein=H/ACA ribonucleoprotein complex non-core subunit NAF1-like] [protein_id=XP_016465632.1] [location=join(16007..16852,23824..23901,23998..25158)] [gbkey=CDS]
Sequence

ATGGTGTATCCCACAGGTGATGAGGTTGAAGAAGATAAAAAAATTCAACCCCTTTCAGAC
CTTGACAAACAAAACGACCCCTTTAGCCTATCTGTTCCTGATTTTGACGACTCTTTTTTG
ACTTCTGCTGATTTTGATTCAATCAAAGATTTAATCTTGGATAGCCCTATAGCTGAAGTT
AAACAAGAACCAGCTGAGTTTGGTTCTGAACAAGTTGAGTTTAGCACTATGGATATGAAT
AATGAATTGGGTGTTTGTGAAATTTCTGAAAAATATGAAGTTCAAAAGGAGGTTTCTGTA
AAGTTGGATTCTTTGAGTTGTTTGAAGGTGGAAAAGAGAGAATGCGGAGAAGTGGGGAAC
TTGGATTGTATAGTTGAGGAGGGGATTGGGAAAGTTAGTATAAATGGGACAGAGGATGAA
AGAGTTGTTGACGAAGATGGAAATAGTGTGAATATTGCTGAAGCTGATATTGGCAATTGT
AGCATTGTCAGTGATAGTGTGGCGGCTGTCGTTAGCAAGAGTGAGGAGAGTGATGAAGTT
GCCATCATCAGTAATAGGGCTGAGGAAAGAAGTGTTGATGAGACAAGTACAGTGAATGGT
GACAAGTTAAAAGGGGGTGAAGATGGGAGCAGTAGTGATACCGAATCTGAAAGTGAAAGC
TCAGCCTCTTCATCGGAGTCTAGTAGCCATGATGATGGGAGTAGCTCGAGCGAGGAAGAA
GAAAGGGAGGTGGATATGGAAGAAGGTGAGATTGAGGCGTCTGATCCCGATGAGATGGTT
GCTTGGAATGAAGATGATGAGGACACTGCTGTTAAGGGACCAATCAGGTCTAAGAATGAG
GTTCAGGCTCTACCCCCAGTTCCTGCAGTGACTGTAACCTTACAACCACATCACCAGATG
CTGCCTGTAGGAGTTGTATCATCGATCATTGGAGCCCAAGTTGTAGTAGAAGGGGTGGAG
AAGCATACTCCTCTTTACGACGGTTCTATTCTCTGGATAACAGAAAGCAGATCTCCTCTA
GGTATAGTGGATGAGATTTTTGGGCCTGTCAAGAACCCTTACTACATTGTAAGATACAAT
TCTGATAACGAAGTCCCAACTGGAATCAACCCGGGCACCTTGATCTCTTTTGTCCCTGAA
TTTTCCGAACATGTGTTAAATGACAACAGTCTTTACAAGAAAGGGTATGATGCATCTGGT
GAAAATGATGAAGAGGTGTCTGAGGCGGAAGAATTTTCAGATGATGAGAAGGAGGCTGAG
TACAAGAGAATGCTGAAAATGAAAAAGAGGGGTGCCACAAATGACCAGAAACCAGGAAAC
AACAAGGACAAAAGGAAACCCAAAAATAAATCTCAGAACTGGAAACACAATGAATCTGCG
GCTGCAGATGTGCAACGTGAAAATGCTAGGCCACCAGTCGACCAAAGTCAACGTTTTATC
TCAGCTGCTGCTGGTTCACTGGATCAAGGTGTTCATCCAAACTCCTCGTTTCAAGGACAT
GTACAGAGTAGTAGGCCTCCATCAGCCCCTCCATTTCCTTCTATGGAAAAAGCCCCTGGT
CAAGCAGCACCATCAGCTGGAGTTTGGACGAATGGAATCCCATATCAGCAGCCCCAGAAT
ATGGGCTTTCCTAATGCACTGCCGACTATTGGCATGCCATGGCCACAACAGATTCATCAA
CAGCAAATGTTTCCAATGCCTTCGCCAAATGCAGTACCTTTTGAGCAGCAAATGAATCCA
ACTCTTTCGTCCAACTTTATCTTCCCAGCAGGTGGCCAACCAAATTTTGGTGCCGGGCCA
TCATTTCTACCTTGGCCTGCATTAGGACAAAATGTTTTTAATCAACCACAACTGTCAATG
GGTCAAATGGCTCCTACACCCTTGATTTTGGGAGGTCAGGTACCAGTGAATGGACCACAA
ATGGTACAGAACAACAATTCACAACCAAATGCTGCAGGTCCAGGCGGCTATATACACGGC
TCTCCAAACTTCAATCAAGGCACTCATTCTGGTGGTGGTCGGAGAGGGAATCACAGGGGT
GGTGGCCGTTTTAGTGGTAGGAGAGGCAGGACACAACGTAACTGA

Peptide Sequence

PEP ID

XP_016465632.1
PEP Infomation

PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1-like [Nicotiana tabacum]
Sequence

MVYPTGDEVEEDKKIQPLSDLDKQNDPFSLSVPDFDDSFLTSADFDSIKDLILDSPIAEV
KQEPAEFGSEQVEFSTMDMNNELGVCEISEKYEVQKEVSVKLDSLSCLKVEKRECGEVGN
LDCIVEEGIGKVSINGTEDERVVDEDGNSVNIAEADIGNCSIVSDSVAAVVSKSEESDEV
AIISNRAEERSVDETSTVNGDKLKGGEDGSSSDTESESESSASSSESSSHDDGSSSSEEE
EREVDMEEGEIEASDPDEMVAWNEDDEDTAVKGPIRSKNEVQALPPVPAVTVTLQPHHQM
LPVGVVSSIIGAQVVVEGVEKHTPLYDGSILWITESRSPLGIVDEIFGPVKNPYYIVRYN
SDNEVPTGINPGTLISFVPEFSEHVLNDNSLYKKGYDASGENDEEVSEAEEFSDDEKEAE
YKRMLKMKKRGATNDQKPGNNKDKRKPKNKSQNWKHNESAAADVQRENARPPVDQSQRFI
SAAAGSLDQGVHPNSSFQGHVQSSRPPSAPPFPSMEKAPGQAAPSAGVWTNGIPYQQPQN
MGFPNALPTIGMPWPQQIHQQQMFPMPSPNAVPFEQQMNPTLSSNFIFPAGGQPNFGAGP
SFLPWPALGQNVFNQPQLSMGQMAPTPLILGGQVPVNGPQMVQNNNSQPNAAGPGGYIHG
SPNFNQGTHSGGGRRGNHRGGGRFSGRRGRTQRN

Transcript Sequence

Gene sequence data has not been registered.